Taxonomy of Archaea domain: Difference between revisions
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:This is a taxonomic list of domain [[Archaea]]. | :This is a taxonomic list of domain [[Archaea]]. | ||
'''Archaea''' is a domain of [[prokaryotes]], single-celled, [[chemolithotrophy|chemolithotrophies]] and [[extremophile|extremophiles]] microorganims. This list show the taxonomy at genus level, based on Garrity et al. (2007) <ref>GARRITY, G. M.; LILBURN, T. G.; COLE, J. R., HARRISON, S. H.; EUZÉBY, J.; TINDALL, B. J. [http://www.taxonomicoutline.org/index.php/toba/article/view/178/210 '''Part 1 ''Archaea''''']. In [http://www.taxonomicoutline.org/index.php/toba/index Taxonomic Outline of the Bacteria and Archaeae (TOBA)]. Version 7.7 2007-4-6. Retrieved 2008-11-20 | '''Archaea''' is a domain of [[prokaryotes]], single-celled, [[chemolithotrophy|chemolithotrophies]] and [[extremophile|extremophiles]] microorganims. This list show the taxonomy at genus level, based on Garrity et al. (2007) <ref>GARRITY, G. M.; LILBURN, T. G.; COLE, J. R., HARRISON, S. H.; EUZÉBY, J.; TINDALL, B. J. [http://www.taxonomicoutline.org/index.php/toba/article/view/178/210 '''Part 1 ''Archaea''''']. In [http://www.taxonomicoutline.org/index.php/toba/index Taxonomic Outline of the Bacteria and Archaeae (TOBA)]. Version 7.7 2007-4-6. Retrieved 2008-11-20. </ref> and Euzéby (2008).<ref>EUZÉBY, J. P. '''[http://www.bacterio.cict.fr/classifphyla.html Classification of domains and phyla - Hierarchical classification of prokaryotes (bacteria)]'''. In [http://www.bacterio.cict.fr/index.html List of Prokaryotic names with Standing in Nomenclature (LPSN)]. Retrieved 2008-11-20.</ref> | ||
==Taxonomy== | ==Taxonomy== |
Revision as of 16:44, 2 March 2009
- This is a taxonomic list of domain Archaea.
Archaea is a domain of prokaryotes, single-celled, chemolithotrophies and extremophiles microorganims. This list show the taxonomy at genus level, based on Garrity et al. (2007) [1] and Euzéby (2008).[2]
Taxonomy
- Domain Archaea Woese, Kandler & Wheelis, 1990
- Phylum I. Crenarchaeota Garrity & Holt, 2001
- Class I. Thermoprotei Reysenbach, 2002
- Order I. Thermoproteales Zillig & Stetter, 1982
- Family I. Thermoproteaceae Zillig & Stetter, 1982
- Genus I. Thermoproteus Zillig & Stetter, 1982
- Genus II. Caldivirga Itoh, Suzuki, Sanchez & Nakase, 1999
- Genus III. Pyrobaculum Huber, Kristjansson & Stetter, 1988
- Genus IV. Thermocladium Itoh, Suzuki & Nakase, 1998
- Genus V. Vulcanisaeta Itoh, Suzuki & Nakase, 2002
- Family II. Thermofilaceae Burggraf, Huber & Stetter, 1997
- Genus I. Thermofilum Zillig & Gierl, 1983
- Family I. Thermoproteaceae Zillig & Stetter, 1982
- Order II. Caldisphaerales Garrity, Bell & Lilburn, 2003
- Family I. Caldisphaeraceae Garrity, Bell & Lilburn, 2003
- Genus I. Caldisphaera Itoh, Suzuki, Sanchez & Nakase, 2003
- Family I. Caldisphaeraceae Garrity, Bell & Lilburn, 2003
- Order III. Desulfurococcales Huber & Stetter, 2002
- Family I. Desulfurococcaceae Zillig & Stetter, 1983
- Genus I. Desulfurococcus Zillig & Stetter, 1983
- Genus II. Acidilobus Prokofeva, Miroshnichenko, Kostrikina, Chernyh, Kuznetsov, Tourova & Bonch-Osmolovskaya, 2000
- Genus III. Aeropyrum Sako, Nomura, Uchida, Ishida, Morii, Koga, Hoaki & Maruyama, 1996
- Genus IV. Ignicoccus Huber, Burggraf, Mayer, Wyschkony, Rachel & Stetter, 2000
- Genus V. Ignisphaera Niederberger, Götz, MacDonald, Ronimus & Morgan, 2006
- Genus VI. Staphylothermus Stetter & Fiala, 1986
- Genus VII. Stetteria Jochimsen, Peinemann-Simon, Völker, Stüben, Botz, Stoffers, Dando & Thomm, 1998
- Genus VIII. Sulfophobococcus Hensel, Matussek, Michalke, Tacke, Tindall, Kohlhoff, Siebers & Dielenschneider, 1997
- Genus IX. Thermodicus Stetter, 2003
- Genus X. Thermosphaera Huber, Dyba, Huber, Burggraf & Rachel, 1998
- Family II. Pyrodictiaceae Burggraf, Huber & Stetter, 1997
- Genus I. Pyrodictium Stetter, König & Stackebrandt, 1984
- Genus II. Hyperthermus Zillig, Holz & Wunderl, 1991
- Genus III. Pyrolobus Blöch, Rachel, Burggraf, Hafenbradl, Jannasch & Stetter, 1999
- Family I. Desulfurococcaceae Zillig & Stetter, 1983
- Order IV. Sulfolobales Stetter, 1989
- Family I. Sulfolobaceae Stetter, 1989
- Genus I. Sulfolobus Brock, Brock, Belly & Weiss, 1972
- Genus II. Acidianus Segerer, Neuner, Kristjansson & Stetter, 1986
- Genus III. Metallosphaera Huber, Spinnler, Gambacorta & Stetter, 1989
- Genus IV. Stygiolobus Segerer, Trincone, Gahrtz & Stetter, 1991
- Genus V. Sulfurisphaera Kurosawa, Itoh, Iwai, Sugai, Uda, Kimura, Horiuchi & Itoh, 1998
- Genus VI. Sulfurococcus Golovacheva, Val'Ekho-Roman & Troitskii, 1985
- Family I. Sulfolobaceae Stetter, 1989
- Order I. Thermoproteales Zillig & Stetter, 1982
- Class I. Thermoprotei Reysenbach, 2002
- Phylum II. Euryarchaeota Garrity & Holt, 2001
- Class I. Methanobacteria Boone, 2002
- Order I. Methanobacteriales Balch & Wolfe, 1981
- Family I. Methanobacteriaceae Barker, 1956
- Genus I. Methanobacterium Kluyver & van Niel, 1936
- Genus II. Methanobrevibacter Balch & Wolfe, 1981
- Genus III. Methanosphaera Miller & Wolin, 1985
- Genus IV. Methanothermobacter Wasserfallen, Nölling, Pfister, Reeve & Conway de Macario, 2000
- Family II. Methanothermaceae Stetter, 1982
- Genus I. Methanothermus Stetter, 1982
- Family I. Methanobacteriaceae Barker, 1956
- Order I. Methanobacteriales Balch & Wolfe, 1981
- Class II. Methanococci Boone, 2002
- Order I. Methanococcales Balch & Wolfe, 1981
- Family I. Methanococcaceae Balch & Wolfe, 1981
- Genus I. Methanococcus Kluyver & van Niel, 1936
- Genus II. Methanothermococcus Whitman, 2002
- Family II. Methanocaldococcaceae Whitman, Boone & Koga, 2002
- Genus I. Methanocaldococcus Whitman, 2002
- Genus II. Methanotorris Whitman, 2002
- Family I. Methanococcaceae Balch & Wolfe, 1981
- Order I. Methanococcales Balch & Wolfe, 1981
- Class III. Methanomicrobia Garrity, Bell & Lilburn, 2003
- Order I. Methanocellales Sakai, Imachi, Hanada, Ohashi, Harada & Kamagata, 2008
- Family I. Methanocellaceae Sakai, Imachi, Hanada, Ohashi, Harada & Kamagata, 2008
- Genus I. Methanocella Sakai, Imachi, Hanada, Ohashi, Harada & Kamagata, 2008
- Family I. Methanocellaceae Sakai, Imachi, Hanada, Ohashi, Harada & Kamagata, 2008
- Order II. Methanomicrobiales Balch & Wolfe, 1981
- Family I. Methanomicrobiaceae Balch & Wolfe, 1981
- Genus I. Methanomicrobium Balch & Wolfe, 1981
- Genus II. Methanoculleus Maestrojuán, Boone, Xun, Mah & Zhang, 1990
- Genus III. Methanofollis Zellner, Boone, Keswani, Whitman, Woese, Hagelstein, Tindall & Stackebrandt, 1999
- Genus IV. Methanogenium Romesser, Wolfe, Mayer, Spiess & Walther-Mauruschat, 1981
- Genus V. Methanolacinia Zellner, Messner, Kneifel, Tindall, Winter & Stackebrandt, 1900
- Genus VI. Methanoplanus Wildgruber, Thomm, König, Ober, Ricchiuto & Stetter, 1984
- Family II. Methanocorpusculaceae Zellner, Stackebrandt, Messner, Tindall, Conway de Macario, Kneifel, Sleyter & Winter, 1989
- Genus I. Methanocorpusculum Zellner, Alten, Stackebrandt, Conway de Macario & Winter, 1988
- Family III. Methanospirillaceae Boone, Whitman & Koga, 2002
- Genus I. Methanospirillum Ferry, Smith & Wolfe, 1974
- Family incertae sedis
- Genus I. Methanocalculus Ollivier, Fardeau, Cayol, Magot, Patel, Prensier & Garcia, 1998
- Genus II. Methanolinea Imachi, Sakai, Sekiguchi, Hanada, Kamagata, Ohashi & Harada, 2008
- Family I. Methanomicrobiaceae Balch & Wolfe, 1981
- Order III. Methanosarcinales Boone, Whitman & Koga, 2002
- Family I. Methanosarcinaceae Balch & Wolfe, 1981
- Genus I. Methanosarcina Kluyver & van Niel, 1936
- Genus II. Methanococcoides Sowers & Ferry, 1985
- Genus III. Methanohalobium Zhilina & Zavarzin, 1988
- Genus IV. Methanohalophilus Paterek & Smith, 1988
- Genus V. Methanolobus König & Stetter, 1983
- Genus VI. Methanomethylovorans Lomans, Maas, Luderer, Op Den Camp, Pol, van der Drft & Vogels, 2004
- Genus VII. Methanimicrococcus Sprenger, van Belzen, Rosenberg, Hackstein & Keltjens, 2000
- Genus VIII. Methanosalsum Boone & Baker, 2002
- Family II. Methanosaetaceae Boone, Whitman & Koga, 2002
- Genus I. Methanosaeta Patel & Sprott, 1990
- Genus II. Methanothrix Huser, Wuhrmann & Zehnder, 1984
- Family III. Methermicoccaceae Cheng, Qiu, Yin, Wu, Hu, Deng & Zhang, 2007
- Genus I. Methermicoccus Cheng, Qiu, Yin, Wu, Hu, Deng & Zhang, 2007
- Family I. Methanosarcinaceae Balch & Wolfe, 1981
- Order I. Methanocellales Sakai, Imachi, Hanada, Ohashi, Harada & Kamagata, 2008
- Class IV. Halobacteria Grant, Kamekura, McGenity & Ventosa, 2002
- Order I. Halobacteriales Grant & Larsen, 1989
- Family I. Halobacteriaceae Gibbons, 1974
- Genus I. Halobacterium Elazari-Volcani, 1957
- Genus II. Haladaptatus Savage, Krumholz, Oren & Elshahed, 2007
- Genus III. Halalkalicoccus Xue, Fan, Ventosa, Grant, Jones, Cowan & Ma, 2005
- Genus IV. Haloarcula Torreblanca, Rodriguez-Valera, Juez, Ventosa, Kamekura & Kates, 1986
- Genus V. Halobaculum Oren, Gurevich, Gemmell & Teske, 1995
- Genus VI. Halobiforma Hezayen, Tindall, Steinbüchel & Rehm, 2002
- Genus VII. Halococcus Schoop, 1935
- Genus VIII. Haloferax Torreblanca, Rodriguez-Valera, Juez, Ventosa, Kamekura & Kates, 1986
- Genus IX. Halogeometricum Montalvo-Rodriguez, Vreeland, Oren, Kessel, Betancourt & López-Garriga, 1998
- Genus X. Halomicrobium Oren, Elevi, Watanabe, Ihara & Corcelli, 2002
- Genus XI. Halopiger Gutiérrez, Castillo, Kamekura, Xue, Ma, Cowan, Jones, Grant & Ventosa, 2007
- Genus XII. Haloplanus Elevi Bardavid, Mana & Oren, 2007
- Genus XIII. Haloquadradum Burns, Janssen, Itoh, Kamekura, Li, Jensen, Rodríguez-Valera, Bolhuis & Dyall-Smith, 2007
- Genus XIV. Halostagnicola Castillo, Gutiérrez, Kamekura, Xue, Ma, Cowan, Jones, Grant & Ventosa, 2006
- Genus XV. Halorhabdus Waino, Tindall & Ingvorsen, 2000
- Genus XVI. Halorubrum McGenity & Grant, 1996
- Genus XVII. Halosarcina Savage, Krumholz, Oren & Elshahed, 2008
- Genus XVIII. Halosimplex Vreeland, Straight, Krammes, Dougherty, Rosenberg & Kamekura, 2003
- Genus XIX. Haloterrigena Ventosa, Gutiérrez, Kamekura & Dyall-Smith, 1999
- Genus XX. Halovivax Castillo, Gutiérrez, Ma, Cowan, Jones, Grant & Ventosa, 2006
- Genus XXI. Natrialba Kamekura & Dyall-Smith, 1996
- Genus XXII. Natrinema McGenity, Gemmell & Grant, 1998
- Genus XXIII. Natronobacterium Tindall, Ross & Grant, 1984
- Genus XXIV. Natronococcus Tindall, Ross & Grant, 1984
- Genus XXV. Natronolimnobius Itoh, Yamaguchi, Zhou & Takashina, 2005
- Genus XXVI. Natronomonas Kamekura, Dyall-Smith, Upasani, Ventosa & Kates, 1997
- Genus XXVII. Natronorubrum Xu, Zhou & Tian, 1999
- Family I. Halobacteriaceae Gibbons, 1974
- Order I. Halobacteriales Grant & Larsen, 1989
- Class V. Thermoplasmata Reysenbach, 2002
- Order I. Thermoplasmatales Reysenbach, 2002
- Famly I. Thermoplasmataceae Reysenbach, 2002
- Genus I. Thermoplasma Darland, Brock, Samsonoff & Conti, 1970
- Family II. Picrophilaceae Schleper, Pühler, Klenk & Zillig, 1996
- Genus I. Picrophilus Schleper, Pühler, Klenk & Zillig, 1996
- Family III. Ferroplasmataceae Golyshina, Pivovarova, Karaviako, Kondrateva, Moore, Abraham, Lünsdorf, Timmis, Yakimov & Golyshin, 2000
- Genus I. Ferroplasma Golyshina, Pivovarova, Karaviako, Kondrateva, Moore, Abraham, Lünsdorf, Timmis, Yakimov & Golyshin, 2000
- Family incertae sedis
- Genus I. Thermogymnomonas Itoh, Yoshikawa & Takashina, 2007
- Famly I. Thermoplasmataceae Reysenbach, 2002
- Order I. Thermoplasmatales Reysenbach, 2002
- Class VI. Thermococci Zillig & Reysenbach, 2002
- Order I. Thermococcales Zillig, Holtz, Klenk, Trent, Wurdel, Janekovic, Imsel & Haas 1988
- Family I. Thermococcaceae Zillig, Holtz, Klenk, Trent, Wurdel, Janekovic, Imsel & Haas 1988
- Genus I. Thermococcus Zillig, 1983
- Genus II. Palaeococcus Takai, Sugai, Itoh & Horikoshi, 2000
- Genus III. Pyrococcus Fiala & Stetter, 1986
- Family I. Thermococcaceae Zillig, Holtz, Klenk, Trent, Wurdel, Janekovic, Imsel & Haas 1988
- Order I. Thermococcales Zillig, Holtz, Klenk, Trent, Wurdel, Janekovic, Imsel & Haas 1988
- Class VII. Archaeoglobi Garrity & Holt, 2002
- Order I. Archaeoglobales Huber & Stetter, 2002
- Family I. Archaeoglobaceae Huber & Stetter, 2001
- Genus I. Archaeoglobus Stetter, 1988
- Genus II. Ferroglobus Hafenbradl, Keller, Dirmeier, Rachel, Robnagel, Burggraf, Huber & Stetter, 1996
- Genus III. Geoglobus Kashefi, Tor, Holmes, Gaw van Praagh, Reysenbach & Lovley, 2002
- Family I. Archaeoglobaceae Huber & Stetter, 2001
- Order I. Archaeoglobales Huber & Stetter, 2002
- Class VIII. Methanopyri Garrity & Holt, 2002
- Order I. Methanopyrales Huber & Stetter, 2002
- Family I. Methanopyraceae Huber & Stetter, 2002
- Genus I. Methanopyrus Kurr, Huber, König, Jannasch, Fricke, Trincone, Kristjansson & Stetter, 1991
- Family I. Methanopyraceae Huber & Stetter, 2002
- Order I. Methanopyrales Huber & Stetter, 2002
- Class I. Methanobacteria Boone, 2002
- Phylum I. Crenarchaeota Garrity & Holt, 2001
Taxonomic notes
Refererences
- ↑ GARRITY, G. M.; LILBURN, T. G.; COLE, J. R., HARRISON, S. H.; EUZÉBY, J.; TINDALL, B. J. Part 1 Archaea. In Taxonomic Outline of the Bacteria and Archaeae (TOBA). Version 7.7 2007-4-6. Retrieved 2008-11-20.
- ↑ EUZÉBY, J. P. Classification of domains and phyla - Hierarchical classification of prokaryotes (bacteria). In List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2008-11-20.