File:SBM image processing steps.png: Difference between revisions
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imported>Daniel Mietchen ({{Image_Details |description = Fig. 2 of http://www.biomedcentral.com/1471-2342/9/20 |author = |copyright = |source = |date-created = |pub-country = |notes = |versions = }}) |
imported>Daniel Mietchen |
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== Summary == | == Summary == | ||
{{Image_Details | {{Image_Details | ||
|description = Fig. 2 of | |description = Fig. 2 of [[CZ:Ref:Turken 2009 Multimodal surface-based morphometry reveals diffuse cortical atrophy in traumatic brain injury]]: [[Surface-based morphometry|SBM]] image processing steps: Surface reconstruction and alignment to standard [[template (neuroimaging)|template]]. A. High-resolution [[MRI|T1-weighted images]] were processed using [[FreeSurfer|FreeSurfer 3.0]] to [[brain mapping|map]] the [[cerebral cortex|cortical]] surface. The image is a lateral view of the [[traumatic brain injury|TBI]] patient's [[left hemisphere]]. B. Computerized reconstruction of the [[white matter surface|gray/white matter boundary]]. A [[smoothing (image processing)|smoothed]] and expanded view of the white matter surface is shown. The image has been [[intensity normalization|intensity normalized]], [[skull stripping|skull-stripped]] and the [[cerebellum]] has been removed. C. [[Surface inflation|Inflation]] of the cortical surface to map [[gyrus|gyral]] and [[sulcus|sulcal]] [[anatomy]]. Gyral regions are shown in green and sulcal regions in red. D. [[Coregistration]] of the subject's cortical surface to a common spherical template. This step allows the assessment of cortical tissue properties with respect to a [[normative database]] using a common [[coordinate system]]. | ||
|author = | |author = [[CZ:Ref:Turken 2009 Multimodal surface-based morphometry reveals diffuse cortical atrophy in traumatic brain injury|Turken AU, Herron TJ, Kang X, O'Connor LE, Sorenson DJ, Baldo JV et al.]] | ||
|copyright = | |copyright = [[CZ:Ref:Turken 2009 Multimodal surface-based morphometry reveals diffuse cortical atrophy in traumatic brain injury|Turken AU, Herron TJ, Kang X, O'Connor LE, Sorenson DJ, Baldo JV et al.]] | ||
|source = | |source = [[CZ:Ref:Turken 2009 Multimodal surface-based morphometry reveals diffuse cortical atrophy in traumatic brain injury]] | ||
|date-created = | |date-created = 24 September 2008 | ||
|pub-country = | |pub-country = United States | ||
|notes = | |notes = | ||
|versions = | |versions = | ||
}} | }} | ||
== Licensing/Copyright status == | == Licensing/Copyright status == | ||
{{CC|by|2.0}} | {{CC|by|2.0}} | ||
Revision as of 15:26, 14 February 2010
Summary
| Title / Description
|
Fig. 2 of CZ:Ref:Turken 2009 Multimodal surface-based morphometry reveals diffuse cortical atrophy in traumatic brain injury: SBM image processing steps: Surface reconstruction and alignment to standard template. A. High-resolution T1-weighted images were processed using FreeSurfer 3.0 to map the cortical surface. The image is a lateral view of the TBI patient's left hemisphere. B. Computerized reconstruction of the gray/white matter boundary. A smoothed and expanded view of the white matter surface is shown. The image has been intensity normalized, skull-stripped and the cerebellum has been removed. C. Inflation of the cortical surface to map gyral and sulcal anatomy. Gyral regions are shown in green and sulcal regions in red. D. Coregistration of the subject's cortical surface to a common spherical template. This step allows the assessment of cortical tissue properties with respect to a normative database using a common coordinate system. |
|---|---|
| Author(s)
|
Turken AU, Herron TJ, Kang X, O'Connor LE, Sorenson DJ, Baldo JV et al. |
| Copyright holder
|
Turken AU, Herron TJ, Kang X, O'Connor LE, Sorenson DJ, Baldo JV et al. See below for license/re-use information. |
| Source
|
CZ:Ref:Turken 2009 Multimodal surface-based morphometry reveals diffuse cortical atrophy in traumatic brain injury |
| Date created
|
24 September 2008 |
| Country of first publication
|
United States |
| Notes
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