File:Tree microbialgenomes nocobwebs.jpg: Difference between revisions

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(DOI: 10.1371/journal.pbio.0030316.g002 Tree_microbialgenomes_nocobwebs.jpg Figure 2.The W-G Tree Based on the Median Tree Algorithm http://biology.plosjournals.org/perlserv/?request=get-document&doi=10.1371/journal.pbio.0030316 The Cobweb of Life Revealed by Genome-Scale Estimates of Horizontal Gene Transfer Ge F, Wang LS, Kim J PLoS Biology Vol. 3, No. 10, e316 A subset of high-quality COG entries, which covers at least seven genomes, was used to build the W-G tree (see Materials and Met...)
 
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DOI: 10.1371/journal.pbio.0030316.g002
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Tree_microbialgenomes_nocobwebs.jpg
Figure 2.The W-G Tree Based on the Median Tree Algorithm
 
http://biology.plosjournals.org/perlserv/?request=get-document&doi=10.1371/journal.pbio.0030316 The Cobweb of Life Revealed by Genome-Scale Estimates of Horizontal Gene Transfer Ge F, Wang LS, Kim J PLoS Biology Vol. 3, No. 10, e316
 
 
A subset of high-quality COG entries, which covers at least seven genomes, was used to build the W-G tree (see Materials and Methods). Branches with bootstrap scores less than 50% were collapsed into the polytomous form. Three domains of life are shown as (A) Archaea, (B–J) Bacteria, and (K) Eukaryote. Species are labeled with different colors based on their inferred HGT rates: red, >4%; yellow, 3%–4%; pink, 2%–3%; blue, 1%–2%; green, <1%. Taxonomy labels are (A) Euryarchaea, (B) Proteobacteria, (C) Chlamydiae, (D) Spirochaetes, (E) Thermotogae, (F) Aquificae, (G) Actinobacteria, (H) Deinococcus, (I) Cyanobacteria, (J) Firmicutes, and (K) Fungi.
 
From: The Cobweb of Life Revealed by Genome-Scale Estimates of Horizontal Gene Transfer Ge F, Wang LS, Kim J PLoS Biology Vol. 3, No. 10, e316
 
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